CDS

Accession Number TCMCG057C29434
gbkey CDS
Protein Id XP_018491320.1
Location join(43548604..43549072,43549684..43550147)
Gene LOC108861846
GeneID 108861846
Organism Raphanus sativus

Protein

Length 310aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018635818.1
Definition PREDICTED: syntaxin-121 isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category U
Description Belongs to the syntaxin family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K08486        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04130        [VIEW IN KEGG]
ko04721        [VIEW IN KEGG]
map04130        [VIEW IN KEGG]
map04721        [VIEW IN KEGG]
GOs GO:0000149        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005802        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006605        [VIEW IN EMBL-EBI]
GO:0006612        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006833        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006887        [VIEW IN EMBL-EBI]
GO:0006906        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009504        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009620        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010119        [VIEW IN EMBL-EBI]
GO:0010148        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016050        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0022406        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0031201        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031348        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032507        [VIEW IN EMBL-EBI]
GO:0032940        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042044        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043495        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0045185        [VIEW IN EMBL-EBI]
GO:0046903        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048278        [VIEW IN EMBL-EBI]
GO:0048284        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050832        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051235        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051651        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0061024        [VIEW IN EMBL-EBI]
GO:0061025        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0072657        [VIEW IN EMBL-EBI]
GO:0072658        [VIEW IN EMBL-EBI]
GO:0072659        [VIEW IN EMBL-EBI]
GO:0072660        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0090150        [VIEW IN EMBL-EBI]
GO:0090174        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:0098791        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0140056        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1990778        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACGCATCCATCGGGAGTGAACCTCGACAAGTTCTTCGAAGACGTCGAATCCGTGAAAGAGGAGCTAGCGGAGCTAGATCGGCTCAACGACGCGCTCCGAACCTCTCACGAGCACAGCAAGACGCTTCACAATGCCGAAGCCGTCAAGGATCTCCGCGCGAAGATGGACGCCGACGTTGGAGTAGCTCTGAAGAAAGCGAAGATGATCAAGGTGAAACTCGAGGCGCTCGATCGCTCCAACGCCGCCAATCGGAGCCTCCCCGGCTGTGGACCTGGATCCTCCTCGGATCGTACCCGGACCTCCGTCCTTAACGGTCTGAGGAAGAAGCTGAAGGACTCGATGGATAGTTTCAACCGCTTGAGGGAGCTGATCTCGTCTGAGTATAGGGATACTGTTCAGAGGAGGTACTTCACTGTCACCGGCGAGAATCCGGATGAGAGGACTTTAGATCGGTTGATCTCTACAGGAGAAAGTGAGAGATTCTTGCAAAAAGCAATACAAGAACAAGGAAGAGGACGTGTCTTAGACACCATCAACGAGATCCAAGAAAGGCATGACGCTGTTAAAGACATTGAGAAGAATCTCAGAGAGCTCCACCAAGTGTTTCTAGACATGGCGGTGCTGGTCGAGCACCAGGGAGCTCAGCTGGACGACATCGAGAGCCACGTGGGCCGAGCTAGCTCCTTTATCCGAGGAGGAACTGAGCAGCTGCAAACCGCTCGGGTTTACCAGAAGAACACACGTAAATGGACATGTTACGCTATTCTCATTCTCATCATCATTATTGTCGTTGTGGTTCTTGTTGTTGTTAAACCATGGAACAACAACGGAGGTGGCGGAGGTGGTGGTGGTGGAGGAGGAAATCCGCCAACTTCAGGTCAAGGGACGCCACCAAGTCCTCCTCAGGCTAGGCGTCTTCTATTGCGTTGA
Protein:  
MTHPSGVNLDKFFEDVESVKEELAELDRLNDALRTSHEHSKTLHNAEAVKDLRAKMDADVGVALKKAKMIKVKLEALDRSNAANRSLPGCGPGSSSDRTRTSVLNGLRKKLKDSMDSFNRLRELISSEYRDTVQRRYFTVTGENPDERTLDRLISTGESERFLQKAIQEQGRGRVLDTINEIQERHDAVKDIEKNLRELHQVFLDMAVLVEHQGAQLDDIESHVGRASSFIRGGTEQLQTARVYQKNTRKWTCYAILILIIIIVVVVLVVVKPWNNNGGGGGGGGGGGNPPTSGQGTPPSPPQARRLLLR